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Department of Pediatrics, College of Medicine, University of Illinois at Chicago, Chicago, Illinois, USA
Key Words. ES cells • HSC • Cell cycle • CD34+ cells • Gene expression
Shi-Jiang Lu, Ph.D., Department of Pediatrics, M/C 856, University of Illinois at Chicago, 840 South Wood Street, Chicago, Illinois 60612, USA. Telephone: 312-413-5766; Fax: 312-413-1526; e-mail sjlu{at}uic.edu
| ABSTRACT |
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and
as well as
, ß, and
globin genes, whereas no expression of embryonic globins could be detected in the cell preparations from BM. Moreover, erythroblast-enriched CD34- cells derived from 4- or 5-week ES cell differentiation cultures also expressed embryonic, fetal, and adult globin genes, with greater ß gene expression, but otherwise were identical to those of the more primitive CD34+ cells derived from 2-week ES cultures. These latter observations may reflect the presence of heterogeneous cell populations within the cell fractions that were compared, or they may represent variability among ES-cell-derived hematopoietic stem cells.
| INTRODUCTION |
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Among the distinctive characteristics of hematopoietic stem cells (HSCs) is their ability to repopulate bone marrow (BM)-ablated animals. Murine HSCs derived from ES cell differentiation in vitro, however, lack long-term reconstitution potential when transplanted into adult recipient mice [9,10]. The failure of ES-cell-derived HSCs to engraft could be related to a failure of these precursors to express appropriate molecules that are critical for engraftment. To explore this possibility, we compared the expression patterns of multiple genes associated with hematopoietic differentiation, HSC homing, and engraftment in CD34+ and CD34+CD38- cells derived from rhesus monkey ES cells with those isolated from fresh or cultured adult BM. These studies demonstrated a remarkable degree of similarity in the expression patterns of these genes in both the CD34+ and CD34+CD38- cells, with only few exceptions [11]. Most notably, the message of the flt3 gene was undetectable in rhesus monkey ES-cell-derived CD34+ and CD34+CD38- cells, whereas substantial flt3 expression was observed in the corresponding cells from fresh BM and in CD34+ cells from cultured BM. The expression of both integrin
L and interleukin-6 (IL-6) receptor genes also was very low, or negligible, in CD34+CD38- cells derived from rhesus monkey ES cell cultures, whereas corresponding cell preparations isolated from fresh BM of rhesus monkeys expressed high levels of these genes. In parallel with these observations, the flt3, integrin
L, and IL-6 receptor genes displayed robust expression in CD34+ lineage-negative (Lin-) cells from murine BM, but had no apparent expression in CD34+Lin- cells from murine ES cells [11].
Several recent studies have demonstrated that the entry of cultured HSCs into the active cell cycle dramatically reduces their homing ability, and subsequently, their long-term repopulating potential [1218]. Eukaryotic cell cycle progression is regulated by the cyclin-dependent kinases (CDKs), whose activities are controlled by multiple mechanisms, including cyclin binding, CDK phosphorylation and dephosphorylation, and binding of CDK inhibitors (CDIs) [19]. CDI p21 protein has been shown to maintain hematopoietic stem cell quiescence by controlling their entry into the cell cycle [20]. The tumor suppressor gene, WT1, induces the expression of p21 and also promotes the quiescence of CD34+CD38- cells [21]. CDI p27 does not affect hematopoietic stem cell cycling and self-renewal, but it markedly alters progenitor proliferation and pool size in the knockout mouse model [22]. These findings demonstrate that cell cycle control genes also play an important role in regulating hematopoietic stem cell self-renewal and differentiation.
In the present study, we examined the expression patterns of cyclins, CDKs, and CDIs, HoxB4, and Bcrp1/ABCG2 in hematopoietic progenitor cells derived from rhesus monkey ES cell cultures and from adult rhesus BM, using semiquantitative reverse transcription-polymerase chain reaction (RT-PCR). We also examined the expression patterns of embryonic, fetal, and adult globin genes. Most HSCs in BM are believed to be in the G0 resting state, whereas ES-cell-derived hematopoietic precursors, which have been exposed to hematopoietic growth factors included in the culture media, are in active growth. These differences could confound comparisons of gene expression between them. To circumvent this potential limitation, we also examined gene expression of CD34+ and CD34+CD38- cells purified from BM that had been maintained under the same culture conditions that were employed for ES cell hematopoietic differentiation.
| MATERIALS AND METHODS |
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BM from rhesus monkeys (aged 2-8 years) was obtained through the animal tissue distribution network from the Wisconsin Regional Primate Center and from the Biologic Resources Laboratory of the University of Illinois at Chicago. Each BM sample was aliquoted into two parts. One part was directly used for the isolation of CD34+ and CD34+CD38- cells (fresh); the other aliquot was incubated in ES differentiation medium for 3 days, then sorted for the purification of CD34+ and CD34+CD38- cells (cultured). Both CD34+ and CD34+CD38- cells, with a purity of >95%, were obtained from rhesus monkey ES cell cultures and fresh and cultured BM. The fluorescence-activated cell-sorting profiles that define the gates for the purification of the CD34+CD38- cells have been reported previously [11].
Enrichment of Rhesus Monkey Erythroblasts from ES Cell Cultures
Rhesus monkey ES cells were grown under differentiation conditions as described [7], then were replated and cultured for erythrocyte formation in vitro. After 4 or 5 weeks of culture, erythroblast clusters were collected by rinsing them off the feeder cells with fresh medium. CD34+ cells were depleted by anti-human CD34+ antibody with Miltenyi magnetic beads (Miltenyi Biotech; Auburn, CA; http://miltenyibiotec.com). Fifteen percent to 20% of the CD34- fractions were found to be erythroblasts by microscopic examination of stained preparations.
Purification of Mouse CD34+Lin- Cells
The mouse D3 ES line was obtained from the ATCC. The maintenance and induction of hematopoietic differentiation of the D3 ES cells and CD34+Lin- cell purification were as described previously [11]. Briefly, at day 13 of differentiation, hematopoietic-like clusters were collected and stained with fluorescein isothiocyanate-conjugated anti-mouse CD34+ (clone RAM34; PharMingen; San Diego, CA; http://www.bdbiosciences.com/pharmingen) and biotinylated anti-mouse lineage panel (containing anti-CD3e, CD11b, CD45R/B220, Ly6G, and TER-119; Baxter) coupled with streptavidin-phycoerythrin. CD34+Lin- cells were sorted with a Coulter flow cytometer. BM cells were obtained by flushing the tibias and femurs of strain 129/sv mice (The Jackson Laboratory; Bar Harbor, ME; http://www.jax.org). CD34+Lin- cells were purified from mononuclear cells as described above. CD34+Lin- cells with a purity of >95% were obtained from both D3 ES cell cultures and mouse BM.
Cytoplasmic RNA Isolation and cDNA Pool Construction
Cytoplasmic RNA isolation and cDNA pool construction for rhesus monkey CD34+ cells, CD34+CD38- cells, and CD34- erythroblasts and mouse CD34+Lin- cells were as described previously [11]. cDNA pools generated by the SMART (Clontech; Palo Alto, CA) procedure have been shown to preserve the relative abundance relationship in original mRNA populations [23], and this procedure has successfully been used in the construction of cDNA pools using less than 1,000 cells [24].
The DNA templates in cDNA pools of CD34+ and CD34+CD38- cells derived from rhesus monkey ES cells and fresh and cultured BM were adjusted to equal amounts based on the relative expression levels of the hypoxanthine phosphoribosyltransferase (HPRT) gene, as described [11]. Similarly, the DNA template quantities in the cDNA pools of CD34+Lin- cells derived from murine ES cells and BM were equalized based on the signal intensities of the
-tubulin gene.
Gene Expression Quantification by Semiquantitative PCR
Inasmuch as many of the genes we undertook to study have not been cloned from the rhesus monkey, whenever rhesus monkey-specific sequences were unavailable, we employed the sequences of the corresponding human genes to design our PCR primers, assuming that the generally close homology between human and rhesus monkey would compensate for minor differences in gene sequences in PCR amplification [25]; this approach has been applied successfully for a large number of other genes in our previous study and other studies [7,11,25,26]. The sense and antisense primer sequences and the corresponding cDNA PCR product sizes are shown in Table 1
. Cytoplasmic RNA (5 µg) from fresh rhesus and murine BM and from K562 cells was reverse transcribed to single-stranded cDNA and used to optimize PCR conditions for the genes we analyzed. The conditions for PCR amplification were as described [11] with annealing temperatures and concentrations of MgCl2 for each specific gene shown in Table 1
. Ten µl of PCR products were separated on a 1.5% agarose gel and visualized by ethidium bromide staining. The relative expression levels in cDNA from ES cells and cultured BM cells were estimated visually, according to the relative band intensities compared with those of cells directly isolated from fresh BM. The expression of genes in mouse CD34+Lin- cells was analyzed similarly.
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| RESULTS |
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The expression of cyclin D family members showed quite different patterns. Very low levels of cyclin D1 message were found in both CD34+ and CD34+CD38- progenitors from all origins, whereas a moderate level of cyclin D2 expression was expressed in these cell preparations and a relatively greater degree of expression was observed in CD34+CD38- cells from ES cells. Low levels, but with no difference in cyclin D3 expression, were detected in both CD34+ and CD34+CD38- cells from all sources except CD34+ cells from cultured BM, which showed a lower expression than the corresponding cell preparation from fresh BM. High levels of cyclin E message were expressed in hematopoietic progenitors from ES and BM, and a somewhat higher expression was observed in CD34+CD38- cells of ES cell origin. Similarly, very high levels of cyclin G1 expression were found in both CD34+ and CD34+CD38- cells; the CD34+CD38- cells from ES differentiation were found to express a higher level of cyclin G1 than those from BM.
CDIs
CDIs can be divided into two families, the INK4 family and the CIP/KIP family. Genes of the INK4 family encode inhibitors of CDK4, and four of these (p15, p16, p18, and p19) have been identified. The CIP/KIP family includes p21, p27, and p57 [27]. The expression of CDIs in hematopoietic progenitor cells from ES and BM showed quite different expression patterns. There were very low to negligible levels of p15 gene message in CD34+ and CD34+CD38- cells of all origins, although a clear positive signal was obtained from the rhesus monkey whole BM control. The message of another INK4 family gene, p16, was only observed in CD34+ cells derived from ES cells, and no detectable level of p16 expression was found in CD34+CD38- cells from all sources and in CD34+ cells from BM. A very low level of p16 mRNA was detected in unfractionated BM. No significant level of p18 message was expressed in hematopoietic progenitor cells derived from ES cells, whereas a substantial level of p18 was detected in both CD34+ and CD34+CD38- cells from fresh BM; a lower, but clearly detectable, level of p18 message was found in corresponding cell preparations from cultured BM. In contrast to other members of the INK4 gene family, the expression of the p19 gene was found to be at very high levels in both CD34+ and CD34+CD38- cells of all origins.
Substantial levels of p21 message were expressed in CD34+ and CD34+CD38- cells from ES cells and fresh BM, and a lower expression of p21 was observed in the corresponding cell preparation from cultured BM. Similar patterns of p27 expression were demonstrated for both CD34+ and CD34+CD38- cells, and cells from ES and cultured BM showed lower p27 expression than those from fresh BM. The expression of p57, which is closely related to p27, was quite different between CD34+ and CD34+CD38- cells. Similar to p27, lower p57 expression was found in CD34+ cells derived from ES cells and from cultured BM. In contrast, the p57 message was only detectable in ES-cell-derived CD34+CD38- cells, and no p57 mRNA was expressed in the cell preparations from BM. The expression of WT1, a tumor suppressor gene that influences cell cycle events by regulating p21 expression [21], was also examined. Lower expression was detected in CD34+ cells derived from ES and cultured BM than in those from fresh BM. Strikingly, no detectable message of WT1 was expressed in CD34+CD38- cells from ES or cultured BM, whereas a substantial level of WT1 expression was demonstrated in the same cell preparation from fresh BM.
Globin Genes
In our previous studies, we demonstrated the expression of
-, ß-, and
-globin genes in hematopoietic progenitor cells from all origins [11]. In this study, we also examined the messages of two embryonic globin genes,
and
, in both CD34+ and CD34+CD38- cells. As shown in Table 2
, very high levels of
- and
-globin gene expression were detected in both CD34+ and CD34+CD38- cells derived from ES cells, and as expected, no detectable message was found in the cell preparations from BM. We also analyzed the expression patterns of globin genes in erythroblast-enriched CD34- cells derived from 4- and 5-week ES cell differentiation cultures. As shown in Figure 2
, a greater ß-globin gene expression was found in erythroblast-enriched CD34- cells derived from 4- and 5-week cultures than in CD34+ cells derived from 2-week cultures. However, similar expression levels of the other four globin genes were observed in erythroblast-enriched CD34- cells and CD34+ cells.
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Gene Expression in Mouse CD34+Lin- Cells
Parallel studies to those of rhesus monkey HSC gene expression were performed to compare their expression in murine hematopoietic precursors. For these studies, we purified hematopoietic CD34+Lin- cells from strain 129/sv mouse BM and from differentiation cultures of mouse D3 ES cells. These experiments showed no apparent correlation of expression for p18, p27, WT1, and cyclin A in hematopoietic progenitor cells derived from the mouse and from the monkey (Fig. 3
and Table 3
). A somewhat lower expression of cyclin A gene was observed in CD34+Lin- cells from murine ES cells compared with that in corresponding cells from murine BM. We also did not observe a lower WT1 gene expression in CD34+Lin- cells derived from murine ES cell cultures, and with the mouse system, there was, rather, a greater level of expression of this gene than with CD34+Lin- cells purified from BM. Expression levels of the p18 and p27 genes were also examined, and no difference could be detected for the p27 gene between CD34+Lin- cells from murine ES cells and those harvested from BM; a somewhat greater level of p18 expression was observed in the corresponding cells from murine BM.
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| DISCUSSION |
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Our previous [11] and present findings demonstrate, overall, a remarkable degree of similarity in the expression patterns of genes that are associated with hematopoietic differentiation, HSC homing and engraftment, and cell cycle regulation in both CD34+ and CD34+CD38- cells from ES cells and BM. These findings speak against the notion that altered expression of these genes has a determinative role in the failure of ES-derived HSCs to engraft in the BM of adult recipients.
As an alternative explanation, it has been proposed that ES-cell-derived HSCs may retain the properties of ES cells, which in turn, may require specific elements of the fetal environment for engraftment to take place. Supporting this idea are observations showing that when mouse yolk sac progenitor cells were transplanted into livers of newborn pups, the presence of long-term repopulating stem cells could be demonstrated, whereas the same cells transplanted into adult animals exhibited no such repopulating potential [34]. Also consistent with the latter hypothesis are our observations that both CD34+ and CD34+CD38- cells derived from fresh and cultured BM only expressed adult and fetal globin genes, whereas the same cell preparations from ES cell differentiation expressed some adult, but mainly fetal and embryonic, globin genes. A somewhat greater ß-globin gene expression could be detected in erythroblast-enriched CD34- cells derived from 4- and 5-week cultures, compared with CD34+ cells derived from 2-week cultures; however, there were remarkably similar expressions of the embryonic and fetal globin genes in erythroblast-enriched CD34- cells and CD34+ cells, resembling the expression patterns of cells derived from the mouse yolk sac [35]. These results suggest that both embryonic hematopoietic progenitor cells and hematopoietic cells derived from rhesus monkey ES cell differentiation exhibit similar gene expression patterns. Cells derived from ES cell differentiation are likely to contain subpopulations of hematopoietic precursors, possibly at varying stages of differentiation, and to understand the full significance of these observed results, it will be important to determine if ß-chain gene expression in cells from ES cell differentiation is limited to a discrete subpopulation of hematopoietic precursors. However, in either case, the preponderance of evidence suggests that ES cell differentiation in vitro has been largely blocked at the embryonic stage, with few definitive HSCs having been generated.
HoxB4, a member of the homeobox gene family, has been shown to be abundantly expressed in primitive hematopoietic cells, but then declines with lineage-specific terminal differentiation [3638]. We found very low, but detectable, levels of HoxB4 message in CD34+ and CD34+CD38- cells derived from differentiated ES cells. It has been reported that overexpression of the HoxB4 gene induced rapid, extensive expansion of HSCs derived from mouse BM ex vivo [31] and produced stem cells that had amplified competitive repopulating ability in transplantation experiments [2830]. Overexpression of HoxB4 also resulted in a significantly greater number of progenitors of mixed erythroid/myeloid colonies and of definitive, but not primitive, erythroid colonies derived from ES cell differentiation [35, 39]. Mouse embryoid bodies derived from HoxB4-transduced ES cells showed a significantly greater adult ß-globin expression [35,39]. When transplanted into lethally irradiated adult mice, these cells homed to and engrafted in the BM, with long-term and multilineage contribution to the peripheral blood [35]. These findings demonstrate that enforced expression of the HoxB4 gene enhances hematopoietic differentiation of mouse ES cells in vitro, and they suggest that primitive HSCs from ES cells are poised to become definitive HSCs in response to the appropriate signals. These observations may provide a fruitful direction for further study of primate ES cell differentiation in vitro.
| ACKNOWLEDGMENT |
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